| Rank | Year | Team | W | L | T | PF | PA | EWP | EWPN |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 2006 | Florida | 12 | 1 | 0 | 354 | 189 | 0.905 | 89.73 |
| 2 | 2006 | Louisville | 12 | 1 | 0 | 491 | 212 | 0.902 | 89.56 |
| 3 | 2006 | Ohio St. | 12 | 1 | 0 | 450 | 166 | 0.895 | 89.14 |
| 4 | 2006 | Southern Cal | 11 | 2 | 0 | 396 | 197 | 0.892 | 88.95 |
| 5 | 2006 | LSU | 11 | 2 | 0 | 438 | 164 | 0.876 | 87.97 |
| 6 | 2006 | Boise St. | 12 | 0 | 0 | 471 | 229 | 0.865 | 87.28 |
| 7 | 2006 | Michigan | 11 | 2 | 0 | 380 | 207 | 0.863 | 87.16 |
| 8 | 2006 | West Virginia | 10 | 2 | 0 | 453 | 279 | 0.845 | 86.07 |
| 9 | 2006 | California | 9 | 3 | 0 | 385 | 235 | 0.828 | 85.07 |
| 10 | 2006 | BYU | 11 | 2 | 0 | 478 | 191 | 0.826 | 84.92 |
| 11 | 2006 | Wisconsin | 11 | 1 | 0 | 346 | 147 | 0.825 | 84.89 |
| 12 | 2006 | Auburn | 11 | 2 | 0 | 322 | 181 | 0.821 | 84.64 |
| 13 | 2006 | Rutgers | 10 | 2 | 0 | 331 | 179 | 0.808 | 83.86 |
| 14 | 2006 | Oklahoma | 11 | 3 | 0 | 424 | 242 | 0.807 | 83.75 |
| 15 | 2006 | Tennessee | 9 | 4 | 0 | 362 | 254 | 0.798 | 83.20 |
| 16 | 2006 | Texas | 9 | 3 | 0 | 411 | 235 | 0.795 | 83.02 |
| 17 | 2006 | Arkansas | 9 | 4 | 0 | 341 | 249 | 0.784 | 82.37 |
| 18 | 2006 | Notre Dame | 10 | 3 | 0 | 403 | 309 | 0.777 | 81.96 |
| 19 | 2006 | Virginia Tech | 9 | 3 | 0 | 298 | 143 | 0.770 | 81.53 |
| 20 | 2006 | Hawaii | 10 | 3 | 0 | 612 | 328 | 0.758 | 80.80 |
| 21 | 2006 | Boston College | 9 | 3 | 0 | 316 | 204 | 0.757 | 80.74 |
| 22 | 2006 | TCU | 10 | 2 | 0 | 334 | 147 | 0.749 | 80.23 |
| 23 | 2006 | Oregon St. | 9 | 4 | 0 | 333 | 294 | 0.748 | 80.21 |
| 24 | 2006 | Wake Forest | 10 | 3 | 0 | 268 | 201 | 0.741 | 79.78 |
| 25 | 2006 | Georgia | 8 | 4 | 0 | 279 | 217 | 0.737 | 79.52 |
| 26 | 2006 | South Carolina | 7 | 5 | 0 | 319 | 223 | 0.725 | 78.78 |
| 27 | 2006 | Nebraska | 8 | 5 | 0 | 372 | 249 | 0.723 | 78.65 |
| 28 | 2006 | Penn St. | 8 | 4 | 0 | 253 | 184 | 0.703 | 77.47 |
| 29 | 2006 | Clemson | 8 | 5 | 0 | 425 | 210 | 0.691 | 76.73 |
| 30 | 2006 | Texas A&M | 8 | 4 | 0 | 327 | 264 | 0.683 | 76.24 |
| 31 | 2006 | Georgia Tech | 8 | 5 | 0 | 311 | 251 | 0.673 | 75.61 |
| 32 | 2006 | UCLA | 7 | 6 | 0 | 299 | 259 | 0.671 | 75.49 |
| 33 | 2006 | Kentucky | 7 | 5 | 0 | 306 | 362 | 0.667 | 75.26 |
| 34 | 2006 | Missouri | 7 | 5 | 0 | 344 | 247 | 0.665 | 75.13 |
| 35 | 2006 | Oregon | 6 | 6 | 0 | 328 | 333 | 0.655 | 74.57 |
| 36 | 2006 | South Florida | 8 | 4 | 0 | 258 | 210 | 0.648 | 74.14 |
| 37 | 2006 | Cincinnati | 7 | 5 | 0 | 243 | 255 | 0.642 | 73.76 |
| 38 | 2006 | Arizona St. | 6 | 6 | 0 | 313 | 312 | 0.641 | 73.68 |
| 39 | 2006 | Arizona | 5 | 6 | 0 | 171 | 225 | 0.640 | 73.63 |
| 40 | 2006 | Texas Tech | 7 | 5 | 0 | 360 | 326 | 0.632 | 73.14 |
| 41 | 2006 | Maryland | 8 | 4 | 0 | 257 | 270 | 0.628 | 72.92 |
| 42 | 2006 | Washington St. | 6 | 6 | 0 | 295 | 277 | 0.616 | 72.17 |
| 43 | 2006 | Oklahoma St. | 6 | 6 | 0 | 406 | 323 | 0.612 | 71.96 |
| 44 | 2006 | Alabama | 6 | 7 | 0 | 298 | 250 | 0.612 | 71.91 |
| 45 | 2006 | Florida St. | 7 | 6 | 0 | 345 | 258 | 0.611 | 71.89 |
| 46 | 2006 | Houston | 9 | 4 | 0 | 420 | 307 | 0.593 | 70.80 |
| 47 | 2006 | Utah | 7 | 5 | 0 | 318 | 251 | 0.583 | 70.16 |
| 48 | 2006 | Navy | 8 | 4 | 0 | 346 | 241 | 0.580 | 69.98 |
| 49 | 2006 | Pittsburgh | 5 | 6 | 0 | 330 | 268 | 0.567 | 69.21 |
| 50 | 2006 | Washington | 5 | 7 | 0 | 262 | 311 | 0.562 | 68.91 |
| 51 | 2006 | Miami (FL) | 6 | 6 | 0 | 204 | 191 | 0.561 | 68.84 |
| 52 | 2006 | Kansas St. | 6 | 6 | 0 | 272 | 286 | 0.560 | 68.74 |
| 53 | 2006 | Nevada | 8 | 5 | 0 | 391 | 249 | 0.550 | 68.17 |
| 54 | 2006 | Minnesota | 5 | 7 | 0 | 366 | 329 | 0.550 | 68.16 |
| 55 | 2006 | Southern Miss | 8 | 5 | 0 | 311 | 260 | 0.548 | 68.06 |
| 56 | 2006 | Central Michigan | 10 | 4 | 0 | 416 | 312 | 0.531 | 67.01 |
| 57 | 2006 | Iowa | 5 | 7 | 0 | 269 | 262 | 0.531 | 66.98 |
| 58 | 2006 | Purdue | 7 | 6 | 0 | 304 | 339 | 0.529 | 66.89 |
| 59 | 2006 | San Jose St. | 8 | 4 | 0 | 307 | 263 | 0.511 | 65.80 |
| 60 | 2006 | Tulsa | 7 | 5 | 0 | 315 | 255 | 0.506 | 65.51 |
| 61 | 2006 | Kansas | 5 | 6 | 0 | 299 | 288 | 0.493 | 64.73 |
| 62 | 2006 | Wyoming | 6 | 6 | 0 | 258 | 264 | 0.471 | 63.36 |
| 63 | 2006 | East Carolina | 7 | 6 | 0 | 280 | 270 | 0.464 | 62.91 |
| 64 | 2006 | Indiana | 5 | 6 | 0 | 249 | 359 | 0.462 | 62.83 |
| 65 | 2006 | New Mexico | 6 | 6 | 0 | 278 | 295 | 0.461 | 62.77 |
| 66 | 2006 | Virginia | 5 | 7 | 0 | 181 | 214 | 0.450 | 62.07 |
| 67 | 2006 | Vanderbilt | 3 | 8 | 0 | 226 | 275 | 0.444 | 61.70 |
| 68 | 2006 | Syracuse | 4 | 8 | 0 | 209 | 295 | 0.437 | 61.27 |
| 69 | 2006 | Western Michigan | 8 | 5 | 0 | 299 | 259 | 0.431 | 60.96 |
| 70 | 2006 | Mississippi | 3 | 8 | 0 | 161 | 268 | 0.430 | 60.89 |
| 71 | 2006 | Ohio | 8 | 5 | 0 | 247 | 250 | 0.422 | 60.39 |
| 72 | 2006 | Air Force | 4 | 8 | 0 | 279 | 302 | 0.410 | 59.68 |
| 73 | 2006 | Michigan St. | 4 | 8 | 0 | 302 | 341 | 0.406 | 59.39 |
| 74 | 2006 | Rice | 7 | 6 | 0 | 350 | 432 | 0.398 | 58.93 |
| 75 | 2006 | Northwestern | 4 | 7 | 0 | 181 | 280 | 0.395 | 58.77 |
| 76 | 2006 | Connecticut | 3 | 8 | 0 | 205 | 317 | 0.387 | 58.28 |
| 77 | 2006 | Northern Illinois | 6 | 6 | 0 | 283 | 261 | 0.378 | 57.73 |
| 78 | 2006 | Baylor | 3 | 8 | 0 | 236 | 381 | 0.371 | 57.32 |
| 79 | 2006 | Colorado | 2 | 9 | 0 | 186 | 248 | 0.361 | 56.69 |
| 80 | 2006 | Mississippi St. | 2 | 9 | 0 | 186 | 306 | 0.354 | 56.29 |
| 81 | 2006 | Middle Tennessee St. | 6 | 6 | 0 | 252 | 302 | 0.347 | 55.82 |
| 82 | 2006 | Ball St. | 5 | 6 | 0 | 302 | 280 | 0.345 | 55.73 |
| 83 | 2006 | Troy | 7 | 5 | 0 | 258 | 289 | 0.345 | 55.72 |
| 84 | 2006 | SMU | 5 | 6 | 0 | 280 | 280 | 0.336 | 55.19 |
| 85 | 2006 | North Carolina St. | 2 | 9 | 0 | 187 | 252 | 0.336 | 55.18 |
| 86 | 2006 | Iowa St. | 3 | 8 | 0 | 198 | 342 | 0.332 | 54.92 |
| 87 | 2006 | Fresno St. | 4 | 8 | 0 | 276 | 339 | 0.324 | 54.43 |
| 88 | 2006 | Colorado St. | 3 | 8 | 0 | 172 | 257 | 0.317 | 53.98 |
| 89 | 2006 | Marshall | 4 | 7 | 0 | 257 | 320 | 0.316 | 53.96 |
| 90 | 2006 | North Carolina | 2 | 9 | 0 | 171 | 324 | 0.314 | 53.85 |
| 91 | 2006 | UTEP | 5 | 7 | 0 | 328 | 375 | 0.305 | 53.29 |
| 92 | 2006 | San Diego St. | 3 | 8 | 0 | 156 | 309 | 0.286 | 52.11 |
| 93 | 2006 | Kent St. | 6 | 6 | 0 | 214 | 241 | 0.280 | 51.76 |
| 94 | 2006 | Akron | 5 | 7 | 0 | 236 | 271 | 0.266 | 50.94 |
| 95 | 2006 | Illinois | 1 | 10 | 0 | 193 | 304 | 0.265 | 50.84 |
| 96 | 2006 | Stanford | 1 | 11 | 0 | 127 | 377 | 0.256 | 50.30 |
| 97 | 2006 | UAB | 3 | 9 | 0 | 225 | 297 | 0.252 | 50.05 |
| 98 | 2006 | Tulane | 4 | 8 | 0 | 224 | 400 | 0.252 | 50.04 |
| 99 | 2006 | Toledo | 4 | 7 | 0 | 240 | 325 | 0.249 | 49.89 |
| 100 | 2006 | Arkansas St. | 6 | 6 | 0 | 182 | 289 | 0.248 | 49.80 |
| 101 | 2006 | Central Florida | 3 | 8 | 0 | 197 | 329 | 0.243 | 49.55 |
| 102 | 2006 | Louisiana-Lafayette | 5 | 6 | 0 | 200 | 289 | 0.235 | 49.04 |
| 103 | 2006 | Louisiana-Monroe | 3 | 8 | 0 | 238 | 261 | 0.222 | 48.23 |
| 104 | 2006 | New Mexico St. | 2 | 8 | 0 | 296 | 340 | 0.212 | 47.65 |
| 105 | 2006 | Florida Atlantic | 4 | 7 | 0 | 149 | 292 | 0.210 | 47.52 |
| 106 | 2006 | Idaho | 3 | 8 | 0 | 176 | 393 | 0.201 | 46.97 |
| 107 | 2006 | Army | 2 | 9 | 0 | 169 | 328 | 0.187 | 46.11 |
| 108 | 2006 | UNLV | 1 | 10 | 0 | 184 | 372 | 0.181 | 45.77 |
| 109 | 2006 | Bowling Green St. | 4 | 8 | 0 | 234 | 340 | 0.180 | 45.67 |
| 110 | 2006 | Memphis | 1 | 10 | 0 | 248 | 351 | 0.169 | 45.04 |
| 111 | 2006 | Miami (OH) | 2 | 10 | 0 | 222 | 304 | 0.163 | 44.65 |
| 112 | 2006 | Duke | 0 | 11 | 0 | 179 | 393 | 0.161 | 44.53 |
| 113 | 2006 | Buffalo | 2 | 10 | 0 | 220 | 431 | 0.124 | 42.31 |
| 114 | 2006 | North Texas | 3 | 9 | 0 | 154 | 304 | 0.123 | 42.21 |
| 115 | 2006 | Eastern Michigan | 1 | 11 | 0 | 167 | 322 | 0.109 | 41.38 |
| 116 | 2006 | Louisiana Tech | 2 | 10 | 0 | 211 | 521 | 0.106 | 41.20 |
| 117 | 2006 | Utah St. | 1 | 11 | 0 | 130 | 462 | 0.098 | 40.70 |
| 118 | 2006 | Temple | 1 | 11 | 0 | 131 | 496 | 0.080 | 39.61 |
| 119 | 2006 | Florida International | 0 | 12 | 0 | 115 | 313 | 0.077 | 39.43 |